Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS21045 | Not Available | Negative | 4438103 - 4439059 | 36918.0 |
| Attr | Not Available | Not Available | Positive | 4439511 - 4439522 | Not Available |
| Lysr family transcriptional regulator | D4M06_RS21050 | Not Available | Negative | 4439735 - 4440634 | 33085.1 |
| Hypothetical protein | D4M06_RS21055 | Not Available | Positive | 4440733 - 4441455 | 25163.5 |
| Regulatory protein ciii | D4M06_RS22495 | Not Available | Positive | 4706459 - 4706539 | 3044.79 |
| Kil protein | D4M06_RS22500 | Not Available | Positive | 4706532 - 4706645 | 4442.47 |
| Hypothetical protein | D4M06_RS22505 | Not Available | Positive | 4706642 - 4706830 | 7478.04 |
| Hypothetical protein | D4M06_RS22510 | Not Available | Positive | 4706839 - 4707519 | 25640.8 |
| Hypothetical protein | D4M06_RS22515 | Not Available | Positive | 4707516 - 4708103 | 21351.2 |
| Abc2 | D4M06_RS22520 | Not Available | Positive | 4708127 - 4708423 | 11268.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




