Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid permease | D4M06_RS12720 | Not Available | Negative | 2753191 - 2754624 | 52175.7 |
| beta-galactosidase subunit beta | D4M06_RS12725 | Not Available | Negative | 2754687 - 2755136 | 17435.5 |
| beta-galactosidase subunit alpha | D4M06_RS12730 | Not Available | Negative | 2755133 - 2758225 | 117761.0 |
| transcriptional regulator ebgr | D4M06_RS12735 | Not Available | Negative | 2758409 - 2759392 | 36226.5 |
| pp_02529 | D4M06_RS12740 | Not Available | Positive | 2759611 - 2759943 | Not Available |
| putrescine aminotransferase | D4M06_RS12745 | Not Available | Negative | 2759985 - 2761475 | 53855.5 |
| methyl-accepting chemotaxis protein | D4M06_RS12750 | Not Available | Positive | 2761782 - 2763302 | 55042.0 |
| padr family transcriptional regulator | D4M06_RS12755 | Not Available | Negative | 2763456 - 2764079 | 23415.8 |
| nadph-dependent ferric chelate reductase | D4M06_RS12760 | Not Available | Positive | 2764367 - 2765131 | 28859.1 |
| Trna-met | Not Available | Not Available | Positive | 2765185 - 2765260 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




