Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf883 domain-containing protein | D4M06_RS12620 | Not Available | Negative | 2731077 - 2731382 | 11052.1 |
| duf1090 domain-containing protein | D4M06_RS12625 | Not Available | Negative | 2731420 - 2731788 | 13906.4 |
| envz/ompr regulon moderator mzra | D4M06_RS12630 | Not Available | Negative | 2731935 - 2732318 | 14164.0 |
| deda family protein | D4M06_RS12635 | Not Available | Negative | 2732322 - 2732984 | 24587.0 |
| transcriptional regulator exur | D4M06_RS12640 | Not Available | Negative | 2733329 - 2734105 | 29837.3 |
| mfs transporter | D4M06_RS12645 | Not Available | Negative | 2734235 - 2735533 | 46895.0 |
| glucuronate isomerase | D4M06_RS12650 | Not Available | Positive | 2736016 - 2737428 | 53964.1 |
| altronate dehydratase | D4M06_RS12655 | Not Available | Positive | 2737443 - 2738930 | 54180.3 |
| ygjv family protein | D4M06_RS12660 | Not Available | Positive | 2739013 - 2739564 | 20590.8 |
| serine/threonine transporter sstt | D4M06_RS12665 | Not Available | Negative | 2739569 - 2740813 | 43480.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




