Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS12520 | Not Available | Negative | 2712367 - 2712906 | 20550.6 |
| dna-binding transcriptional activator tdcr | D4M06_RS12525 | Not Available | Negative | 2713162 - 2713506 | 13553.3 |
| transcriptional regulator tdca | D4M06_RS12530 | Not Available | Positive | 2713695 - 2714633 | 34540.9 |
| bifunctional threonine ammonia-lyase/l-serine ammonia-lyase tdcb | D4M06_RS12535 | Not Available | Positive | 2714732 - 2715721 | 35234.5 |
| threonine/serine transporter tdcc | D4M06_RS12540 | Not Available | Positive | 2715743 - 2717074 | 48881.8 |
| propionate kinase | D4M06_RS12545 | Not Available | Positive | 2717100 - 2718308 | 43401.7 |
| 2-ketobutyrate formate-lyase/pyruvate formate-lyase | D4M06_RS12550 | Not Available | Positive | 2718342 - 2720636 | 85939.4 |
| enamine/imine deaminase | D4M06_RS12555 | Not Available | Positive | 2720650 - 2721039 | 14008.0 |
| l-serine ammonia-lyase | D4M06_RS12560 | Not Available | Positive | 2721111 - 2722475 | 48562.6 |
| haaap family serine/threonine permease | D4M06_RS12565 | Not Available | Positive | 2722750 - 2724081 | 48325.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




