Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS20995 | Not Available | Positive | 4430190 - 4430780 | 23199.8 |
| hypothetical protein | D4M06_RS21000 | Not Available | Positive | 4430780 - 4431346 | 21425.1 |
| Ogr | D4M06_RS21005 | Not Available | Negative | 4431756 - 4432028 | 10247.1 |
| Amber mutation-suppressing protein | D4M06_RS21010 | Not Available | Negative | 4432034 - 4432585 | 20658.9 |
| Head size determination protein sid | D4M06_RS21015 | Not Available | Negative | 4432582 - 4433334 | 27958.4 |
| Transcriptional regulator | D4M06_RS21020 | Not Available | Positive | 4434268 - 4434528 | 9430.36 |
| Putative ci repressor | D4M06_RS21025 | Not Available | Positive | 4434525 - 4435082 | 20086.6 |
| hypothetical protein | D4M06_RS21030 | Not Available | Positive | 4435079 - 4435300 | 8308.96 |
| Hypothetical protein | D4M06_RS21035 | Not Available | Positive | 4435300 - 4435623 | 11854.6 |
| Dna primase | D4M06_RS21040 | Not Available | Positive | 4435637 - 4437970 | 85090.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




