Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pentaheme c-type cytochrome torc | D4M06_RS12245 | Not Available | Negative | 2659466 - 2660638 | 43594.8 |
| two-component system response regulator torr | D4M06_RS12250 | Not Available | Positive | 2660768 - 2661460 | 26270.9 |
| tmao reductase system periplasmic protein tort | D4M06_RS12255 | Not Available | Negative | 2661433 - 2662461 | 37952.1 |
| tmao reductase system sensor histidine kinase/response regulator tors | D4M06_RS12260 | Not Available | Positive | 2662544 - 2665288 | 100852.0 |
| 4fe-4s binding protein | D4M06_RS12265 | Not Available | Positive | 2665360 - 2666433 | 40034.3 |
| addiction module toxin, gnsa/gnsb family | D4M06_RS12270 | Not Available | Negative | 2666482 - 2666616 | 5049.2 |
| protein ymce | D4M06_RS12275 | Not Available | Negative | 2666644 - 2666874 | 8683.6 |
| cold-shock protein | D4M06_RS12280 | Not Available | Negative | 2666849 - 2667037 | 7104.55 |
| cold shock protein cspg | D4M06_RS12285 | Not Available | Negative | 2667048 - 2667260 | 7781.14 |
| cold shock-like protein csph | D4M06_RS12290 | Not Available | Positive | 2667546 - 2667758 | 7720.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




