Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eal domain-containing protein | D4M06_RS12090 | Not Available | Negative | 2620890 - 2622500 | 60797.1 |
| ggdef domain-containing protein | D4M06_RS12095 | Not Available | Negative | 2622598 - 2623956 | 51644.4 |
| poly-beta-1,6 n-acetyl-d-glucosamine export porin pgaa | D4M06_RS12100 | Not Available | Positive | 2624543 - 2626966 | 92211.9 |
| poly-beta-1,6-n-acetyl-d-glucosamine n-deacetylase pgab | D4M06_RS12105 | Not Available | Positive | 2626975 - 2628993 | 77429.9 |
| poly-beta-1,6 n-acetyl-d-glucosamine synthase | D4M06_RS12110 | Not Available | Positive | 2628986 - 2630311 | 50771.6 |
| poly-beta-1,6-n-acetyl-d-glucosamine biosynthesis protein pgad | D4M06_RS12115 | Not Available | Positive | 2630313 - 2630726 | 16082.7 |
| phosphate starvation-inducible protein phoh | D4M06_RS12120 | Not Available | Negative | 2630776 - 2631840 | 39267.1 |
| deferrochelatase/peroxidase efeb | D4M06_RS12125 | Not Available | Negative | 2632184 - 2633455 | 46622.7 |
| iron uptake system protein efeo | D4M06_RS12130 | Not Available | Negative | 2633461 - 2634588 | 41125.8 |
| ftr1 family protein | D4M06_RS12135 | Not Available | Negative | 2634646 - 2635476 | 30345.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




