Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| filamentous hemagglutinin n-terminal domain-containing protein | D4M06_RS12040 | Not Available | Negative | 2606037 - 2609849 | 130555.0 |
| hypothetical protein | D4M06_RS12045 | Not Available | Positive | 2611240 - 2611863 | 24790.5 |
| type 1 fimbrial protein | D4M06_RS12050 | Not Available | Positive | 2611906 - 2612466 | 18943.2 |
| molecular chaperone | D4M06_RS12055 | Not Available | Positive | 2612552 - 2613253 | 25895.1 |
| fimbrial biogenesis outer membrane usher protein | D4M06_RS12060 | Not Available | Positive | 2613306 - 2615828 | 91172.3 |
| outer membrane protein | D4M06_RS12065 | Not Available | Positive | 2615844 - 2617178 | 46894.1 |
| molecular chaperone | D4M06_RS12070 | Not Available | Positive | 2617175 - 2617864 | 25778.9 |
| sdr family oxidoreductase | D4M06_RS12075 | Not Available | Negative | 2618010 - 2618792 | 28598.5 |
| transcriptional regulator | D4M06_RS12080 | Not Available | Positive | 2619480 - 2620292 | 30959.5 |
| fidl | D4M06_RS12085 | Not Available | Positive | 2620297 - 2620788 | 18996.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




