Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | D4M06_RS11990 | Not Available | Negative | 2595591 - 2596298 | 25322.7 |
| atp-binding protein | D4M06_RS11995 | Not Available | Negative | 2596309 - 2597262 | 36251.3 |
| beta-ketoacyl synthase | D4M06_RS12000 | Not Available | Negative | 2597259 - 2598482 | 44112.5 |
| beta-ketoacyl-acp synthase | D4M06_RS12005 | Not Available | Negative | 2598487 - 2601045 | 92186.4 |
| aminomethyl transferase family protein | D4M06_RS12010 | Not Available | Negative | 2601119 - 2602279 | 43516.7 |
| acyl carrier protein | D4M06_RS12015 | Not Available | Negative | 2602315 - 2602596 | 10598.6 |
| beta-hydroxyacyl-acp dehydratase | D4M06_RS12020 | Not Available | Negative | 2602618 - 2603166 | 20926.3 |
| sdr family oxidoreductase | D4M06_RS12025 | Not Available | Negative | 2603170 - 2603931 | 27203.2 |
| holo-[acyl-carrier-protein] synthase | D4M06_RS12030 | Not Available | Negative | 2603945 - 2604313 | 13685.5 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | D4M06_RS12035 | Not Available | Negative | 2604329 - 2605948 | 60960.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




