Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylneuraminate epimerase | D4M06_RS11880 | Not Available | Negative | 2570375 - 2571481 | 39552.2 |
| n-acetylneuraminic acid outer membrane channel nanc | D4M06_RS11885 | Not Available | Negative | 2571501 - 2572217 | 27889.4 |
| type 1 fimbria regulatory protein fimb | D4M06_RS11890 | Not Available | Positive | 2573673 - 2574275 | 22994.8 |
| type 1 fimbria regulatory protein fime | D4M06_RS11895 | Not Available | Positive | 2574753 - 2575349 | 23102.7 |
| metal abc transporter substrate-binding lipoprotein/fibrin-binding adhesin fima | D4M06_RS11900 | Not Available | Positive | 2575814 - 2576362 | 18225.3 |
| type 1 fimbrial protein | D4M06_RS11905 | Not Available | Positive | 2576427 - 2576966 | 19315.3 |
| type 1 fimbria chaperone fimc | D4M06_RS11910 | Not Available | Positive | 2577003 - 2577728 | 26644.5 |
| dead/deah box helicase family protein | D4M06_RS11920 | Not Available | Negative | 2578612 - 2580972 | 88039.5 |
| inovirus gp2 family protein | D4M06_RS11925 | Not Available | Negative | 2581127 - 2581690 | 22435.9 |
| duf3987 domain-containing protein | D4M06_RS11930 | Not Available | Negative | 2582511 - 2583896 | 52347.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




