Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | D4M06_RS11765 | Not Available | Positive | 2526296 - 2528245 | 74027.3 |
| duf4160 domain-containing protein | D4M06_RS11770 | Not Available | Negative | 2528528 - 2528905 | 14275.1 |
| nipsnap family protein | D4M06_RS11775 | Not Available | Negative | 2529027 - 2529359 | 12143.5 |
| duf1643 domain-containing protein | D4M06_RS11780 | Not Available | Negative | 2530363 - 2530830 | 17375.9 |
| recombinase family protein | D4M06_RS11785 | Not Available | Positive | 2531023 - 2531592 | 20635.1 |
| hypothetical protein | D4M06_RS11790 | Not Available | Negative | 2531791 - 2533107 | 50278.8 |
| hypothetical protein | D4M06_RS11795 | Not Available | Negative | 2533259 - 2534032 | 28565.0 |
| helix-turn-helix transcriptional regulator | D4M06_RS11800 | Not Available | Positive | 2534155 - 2534613 | 16866.9 |
| hnh endonuclease | D4M06_RS11815 | Not Available | Negative | 2536616 - 2537467 | 32209.4 |
| n-acetylneuraminate epimerase | D4M06_RS11820 | Not Available | Negative | 2537454 - 2537762 | 11755.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




