Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metalloprotease pmba | D4M06_RS11615 | Not Available | Positive | 2492597 - 2493949 | 48372.4 |
| cytochrome b562 | D4M06_RS11620 | Not Available | Positive | 2494133 - 2494519 | 14063.7 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | D4M06_RS11625 | Not Available | Negative | 2494564 - 2495028 | 17446.9 |
| anaerobic ribonucleoside-triphosphate reductase | D4M06_RS11630 | Not Available | Negative | 2495218 - 2497356 | 80041.0 |
| alpha,alpha-phosphotrehalase | D4M06_RS11635 | Not Available | Negative | 2497750 - 2499405 | 63777.0 |
| pts trehalose transporter subunit iibc | D4M06_RS11640 | Not Available | Negative | 2499455 - 2500876 | 51105.0 |
| hth-type transcriptional regulator trer | D4M06_RS11645 | Not Available | Negative | 2500995 - 2501942 | 34588.8 |
| mgta regulatory leader peptide mgtl | D4M06_RS11650 | Not Available | Positive | 2502127 - 2502180 | 2122.69 |
| magnesium-translocating p-type atpase | D4M06_RS11655 | Not Available | Positive | 2502321 - 2505017 | 99472.3 |
| 2-iminobutanoate/2-iminopropanoate deaminase | D4M06_RS11660 | Not Available | Negative | 2505223 - 2505609 | 13612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




