Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system chps family antitoxin | D4M06_RS11565 | Not Available | Positive | 2483085 - 2483336 | 9300.18 |
| endoribonuclease toxin chpb | D4M06_RS11570 | Not Available | Positive | 2483330 - 2483680 | 12512.2 |
| inorganic diphosphatase | D4M06_RS11575 | Not Available | Negative | 2483760 - 2484290 | 19704.6 |
| galactofuranose abc transporter substrate-binding protein ytfq | D4M06_RS11580 | Not Available | Positive | 2484600 - 2485556 | 34332.5 |
| sugar abc transporter atp-binding protein | D4M06_RS11585 | Not Available | Positive | 2485696 - 2487198 | 55291.5 |
| abc transporter permease | D4M06_RS11590 | Not Available | Positive | 2487212 - 2488234 | 35528.1 |
| sugar abc transporter permease yjff | D4M06_RS11595 | Not Available | Positive | 2488221 - 2489216 | 34965.9 |
| class 1 fructose-bisphosphatase | D4M06_RS11600 | Not Available | Negative | 2489249 - 2490247 | 36768.9 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | D4M06_RS11605 | Not Available | Positive | 2490423 - 2491796 | 49882.0 |
| ribosome-associated protein | D4M06_RS11610 | Not Available | Negative | 2491952 - 2492503 | 21360.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




