Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS11460 | Not Available | Negative | 2460463 - 2460609 | 5184.08 |
| secretion protein espo | D4M06_RS11465 | Not Available | Positive | 2461037 - 2461315 | 10353.2 |
| is200/is605 family element transposase accessory protein tnpb | D4M06_RS11470 | Not Available | Positive | 2461560 - 2462576 | 38008.7 |
| cell division protein ytfb | D4M06_RS11480 | Not Available | Negative | 2462711 - 2463349 | 23555.0 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | D4M06_RS11485 | Not Available | Positive | 2463567 - 2464187 | 22217.5 |
| d-serine/d-alanine/glycine transporter | D4M06_RS11490 | Not Available | Positive | 2464496 - 2465908 | 51662.6 |
| iron-sulfur cluster repair protein ytfe | D4M06_RS11495 | Not Available | Negative | 2465953 - 2466615 | 24853.1 |
| dmt family transporter | D4M06_RS11500 | Not Available | Negative | 2466723 - 2467688 | 35266.7 |
| nad(p)h:quinone oxidoreductase | D4M06_RS11505 | Not Available | Negative | 2467796 - 2468656 | 29827.3 |
| winged helix-turn-helix transcriptional regulator | D4M06_RS11510 | Not Available | Positive | 2468745 - 2469125 | 14076.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




