Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional anthranilate synthase glutamate amidotransferase component trpg/anthranilate phosphoribosyltransferase trpd | D4M06_RS11390 | Not Available | Positive | 2448768 - 2450363 | 56912.4 |
| bifunctional indole-3-glycerol-phosphate synthase trpc/phosphoribosylanthranilate isomerase trpf | D4M06_RS11395 | Not Available | Positive | 2450367 - 2451725 | 49305.0 |
| tryptophan synthase subunit beta | D4M06_RS11400 | Not Available | Positive | 2451737 - 2452930 | 42999.6 |
| tryptophan synthase subunit alpha | D4M06_RS11405 | Not Available | Positive | 2452930 - 2453736 | 28726.8 |
| general stress protein | D4M06_RS11410 | Not Available | Positive | 2454117 - 2454296 | 6002.69 |
| ferritin-like domain-containing protein | D4M06_RS11415 | Not Available | Positive | 2454382 - 2454882 | 18598.2 |
| ferritin-like domain-containing protein | D4M06_RS11420 | Not Available | Positive | 2454928 - 2455434 | 18997.6 |
| hypothetical protein | D4M06_RS11430 | Not Available | Positive | 2455936 - 2456154 | 8293.1 |
| t3ss effector guanine nucleotide exchange factor espm1 | D4M06_RS11450 | Not Available | Negative | 2458905 - 2459495 | 21855.2 |
| t3ss effector e3 ubiquitin-protein ligase nleg | D4M06_RS11455 | Not Available | Positive | 2459679 - 2460326 | 24583.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




