Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycin family protein | D4M06_RS11340 | Not Available | Positive | 2439797 - 2440048 | 9386.17 |
| protease sohb | D4M06_RS11345 | Not Available | Negative | 2440084 - 2441133 | 39384.7 |
| ycik family oxidoreductase | D4M06_RS11350 | Not Available | Positive | 2441353 - 2442111 | 27972.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | D4M06_RS11355 | Not Available | Positive | 2442108 - 2442698 | 22028.2 |
| 23s rrna pseudouridine(2605) synthase rlub | D4M06_RS11360 | Not Available | Negative | 2442738 - 2443610 | 32599.3 |
| duf2207 domain-containing protein | D4M06_RS11365 | Not Available | Negative | 2443823 - 2445406 | 59845.3 |
| threonylcarbamoyl-amp synthase | D4M06_RS11370 | Not Available | Negative | 2445434 - 2446054 | 23213.2 |
| 5'-3' exoribonuclease | D4M06_RS11375 | Not Available | Negative | 2446051 - 2446932 | 32613.8 |
| trp operon leader peptide | D4M06_RS11380 | Not Available | Positive | 2447070 - 2447114 | 1723.19 |
| anthranilate synthase component i | D4M06_RS11385 | Not Available | Positive | 2447206 - 2448768 | 57596.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




