Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide assembly protein lapb | D4M06_RS11290 | Not Available | Negative | 2428738 - 2429907 | 44533.6 |
| lipopolysaccharide assembly protein lapa | D4M06_RS11295 | Not Available | Negative | 2429914 - 2430222 | 11411.2 |
| phosphatidylglycerophosphatase b | D4M06_RS11300 | Not Available | Negative | 2430371 - 2431135 | 29022.8 |
| gtp cyclohydrolase ii | D4M06_RS11305 | Not Available | Positive | 2431305 - 2431895 | 21837.3 |
| aconitate hydratase acna | D4M06_RS11310 | Not Available | Negative | 2431959 - 2434634 | 97664.8 |
| hypothetical protein | D4M06_RS11315 | Not Available | Negative | 2434798 - 2434893 | 3822.77 |
| hypothetical protein | D4M06_RS11320 | Not Available | Negative | 2435007 - 2435174 | 6334.2 |
| ymia family putative membrane protein | D4M06_RS11325 | Not Available | Negative | 2435177 - 2435341 | 6232.76 |
| hth-type transcriptional regulator cysb | D4M06_RS11330 | Not Available | Negative | 2435636 - 2436610 | 36152.5 |
| type i dna topoisomerase | D4M06_RS11335 | Not Available | Negative | 2436820 - 2439417 | 97356.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




