Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage head decoration protein | D4M06_RS20875 | Not Available | Positive | 4410412 - 4410747 | 11927.0 |
| phage head-tail connector protein | D4M06_RS20880 | Not Available | Positive | 4410760 - 4411173 | 15134.2 |
| Gp1 | D4M06_RS20885 | Not Available | Positive | 4411379 - 4411921 | 20255.4 |
| hypothetical protein | D4M06_RS20890 | Not Available | Positive | 4412177 - 4412458 | 11110.4 |
| Attr | Not Available | Not Available | Positive | 4412953 - 4412964 | Not Available |
| two-component system sensor histidine kinase phoq | D4M06_RS20895 | Not Available | Negative | 4413059 - 4414519 | 55312.9 |
| Hybrid sensor histidine kinase - response regulator | D4M06_RS20900 | Not Available | Negative | 4414519 - 4415190 | 25483.7 |
| Purb-like adenylosuccinate lyase | D4M06_RS20905 | Not Available | Negative | 4415359 - 4416729 | 51572.7 |
| high frequency lysogenization protein hfld | D4M06_RS20910 | Not Available | Negative | 4416733 - 4417374 | 22948.1 |
| trna 2-thiouridine(34) synthase mnma | D4M06_RS20915 | Not Available | Negative | 4417410 - 4418516 | 40989.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




