Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymja family protein | D4M06_RS11190 | Not Available | Positive | 2405571 - 2405816 | 9307.77 |
| peptide abc transporter substrate-binding protein sapa | D4M06_RS11195 | Not Available | Positive | 2406129 - 2407772 | 61580.3 |
| peptide abc transporter permease sapb | D4M06_RS11200 | Not Available | Positive | 2407769 - 2408734 | 36030.1 |
| peptide abc transporter permease sapc | D4M06_RS11205 | Not Available | Positive | 2408721 - 2409611 | 31568.0 |
| peptide abc transporter atp-binding protein sapd | D4M06_RS11210 | Not Available | Positive | 2409611 - 2410603 | 37662.9 |
| peptide abc transporter atp-binding protein sapf | D4M06_RS11215 | Not Available | Positive | 2410605 - 2411411 | 30571.5 |
| multidrug effflux mfs transporter | D4M06_RS11220 | Not Available | Negative | 2411463 - 2412626 | 41422.1 |
| tolc family protein | D4M06_RS11225 | Not Available | Negative | 2412635 - 2414008 | 49395.4 |
| multidrug efflux rnd transporter permease subunit | D4M06_RS11230 | Not Available | Negative | 2414031 - 2417114 | 111435.0 |
| efflux rnd transporter periplasmic adaptor subunit | D4M06_RS11235 | Not Available | Negative | 2417114 - 2418235 | 39614.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




