Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | D4M06_RS11025 | Not Available | Positive | 2371832 - 2372470 | 23294.2 |
| murein tripeptide amidase mpaa | D4M06_RS11030 | Not Available | Positive | 2372761 - 2373489 | 26559.4 |
| l-ala-d/l-glu epimerase | D4M06_RS11035 | Not Available | Negative | 2373464 - 2374429 | 34658.9 |
| thiol peroxidase | D4M06_RS11040 | Not Available | Positive | 2374548 - 2375054 | 17836.3 |
| transcriptional regulator tyrr | D4M06_RS11045 | Not Available | Negative | 2375098 - 2376639 | 57689.6 |
| tigr01620 family protein | D4M06_RS11050 | Not Available | Negative | 2376787 - 2377848 | 39408.5 |
| ycjx family protein | D4M06_RS11055 | Not Available | Negative | 2377845 - 2379242 | 52613.5 |
| laci family transcriptional regulator | D4M06_RS11060 | Not Available | Positive | 2379397 - 2380395 | 36237.3 |
| monomeric porin ompg | D4M06_RS11065 | Not Available | Negative | 2380506 - 2381411 | 34889.9 |
| abc transporter atp-binding protein | D4M06_RS11070 | Not Available | Negative | 2381456 - 2382538 | 40179.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




