Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20 family metallo-hydrolase | D4M06_RS10965 | Not Available | Positive | 2358450 - 2359760 | 46630.9 |
| amidohydrolase | D4M06_RS10970 | Not Available | Positive | 2359760 - 2361205 | 52224.5 |
| methylated-dna--[protein]-cysteine s-methyltransferase | D4M06_RS10980 | Not Available | Positive | 2362778 - 2363293 | 19181.2 |
| fnr family transcription factor | D4M06_RS10985 | Not Available | Positive | 2363488 - 2364240 | 27968.9 |
| universal stress protein uspe | D4M06_RS10990 | Not Available | Positive | 2364392 - 2365342 | 35708.9 |
| duf2534 family protein | D4M06_RS10995 | Not Available | Negative | 2365392 - 2365649 | 9339.82 |
| low conductance mechanosensitive channel ynai | D4M06_RS11000 | Not Available | Positive | 2365893 - 2366924 | 38756.8 |
| peptide abc transporter substrate-binding protein | D4M06_RS11005 | Not Available | Negative | 2366975 - 2368588 | 59931.4 |
| lysr family transcriptional regulator | D4M06_RS11010 | Not Available | Negative | 2368924 - 2369823 | 33477.9 |
| alpha/beta hydrolase | D4M06_RS11015 | Not Available | Positive | 2369961 - 2370881 | 33620.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




