Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf333 domain-containing protein | D4M06_RS10910 | Not Available | Negative | 2344773 - 2345039 | 8696.44 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | D4M06_RS10915 | Not Available | Positive | 2345313 - 2348837 | 128785.0 |
| universal stress protein uspf | D4M06_RS10925 | Not Available | Positive | 2350457 - 2350891 | 15959.4 |
| trna 2-thiocytidine(32) synthetase ttca | D4M06_RS10930 | Not Available | Positive | 2351067 - 2352002 | 35461.8 |
| atp-dependent rna helicase dbpa | D4M06_RS10935 | Not Available | Negative | 2352131 - 2353504 | 49218.7 |
| hypothetical protein | D4M06_RS10940 | Not Available | Negative | 2353537 - 2353707 | 6324.73 |
| zinc transporter zntb | D4M06_RS10945 | Not Available | Negative | 2353982 - 2354965 | 36614.3 |
| diguanylate cyclase dgcm | D4M06_RS10950 | Not Available | Positive | 2355220 - 2356452 | 46497.9 |
| dna endonuclease smra | D4M06_RS10955 | Not Available | Negative | 2356473 - 2357036 | 21563.8 |
| lysr family transcriptional regulator | D4M06_RS10960 | Not Available | Negative | 2357366 - 2358274 | 34045.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




