Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | D4M06_RS10855 | Not Available | Positive | 2335658 - 2336839 | 43235.8 |
| amino acid abc transporter permease | D4M06_RS10860 | Not Available | Positive | 2336849 - 2337952 | 41478.7 |
| amino acid abc transporter atp-binding protein | D4M06_RS10865 | Not Available | Positive | 2337960 - 2338718 | 28564.0 |
| Trna-thr | Not Available | Not Available | Positive | 2339104 - 2339179 | Not Available |
| surface-exposed virulence protein biga | D4M06_RS10880 | Not Available | Negative | 2339185 - 2339480 | 10666.5 |
| ydbl family protein | D4M06_RS10885 | Not Available | Negative | 2339894 - 2340217 | 11742.2 |
| ynbe family lipoprotein | D4M06_RS10890 | Not Available | Negative | 2340225 - 2340410 | 6815.51 |
| ydbh family protein | D4M06_RS10895 | Not Available | Negative | 2340407 - 2343046 | 96824.2 |
| d-lactate dehydrogenase | D4M06_RS10900 | Not Available | Positive | 2343254 - 2344243 | 36522.8 |
| heat shock protein hslj | D4M06_RS10905 | Not Available | Positive | 2344354 - 2344776 | 15182.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




