Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | D4M06_RS20825 | Not Available | Positive | 4405001 - 4405465 | 16849.8 |
| hypothetical protein | D4M06_RS20830 | Not Available | Positive | 4405458 - 4405691 | 9178.06 |
| duf4222 domain-containing protein | D4M06_RS20835 | Not Available | Positive | 4405697 - 4405996 | 11454.8 |
| Primase/helicase | D4M06_RS20840 | Not Available | Positive | 4405993 - 4407393 | 52038.0 |
| hypothetical protein | D4M06_RS20845 | Not Available | Positive | 4407594 - 4407845 | 9491.28 |
| Putative ssdna binding protein | D4M06_RS20850 | Not Available | Positive | 4407842 - 4408252 | 14308.8 |
| Transcriptional regulator | D4M06_RS20855 | Not Available | Positive | 4408263 - 4408535 | 10521.3 |
| hypothetical protein | D4M06_RS20860 | Not Available | Positive | 4408662 - 4408886 | 8635.39 |
| hypothetical protein | D4M06_RS20865 | Not Available | Positive | 4409138 - 4409344 | 7359.94 |
| Bacteriophage major capsid protein | D4M06_RS20870 | Not Available | Positive | 4409344 - 4410399 | 39510.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




