Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator nanr | D4M06_RS10650 | Not Available | Negative | 2289464 - 2290255 | 29496.0 |
| anaerobic c4-dicarboxylate transporter dcuc | D4M06_RS10655 | Not Available | Positive | 2290635 - 2291999 | 49199.7 |
| clpxp protease specificity-enhancing factor | D4M06_RS10660 | Not Available | Negative | 2292034 - 2292531 | 18263.4 |
| stringent starvation protein a | D4M06_RS10665 | Not Available | Negative | 2292537 - 2293175 | 24306.3 |
| 30s ribosomal protein s9 | D4M06_RS10670 | Not Available | Negative | 2293570 - 2293962 | 14857.1 |
| 50s ribosomal protein l13 | D4M06_RS10675 | Not Available | Negative | 2293978 - 2294406 | 16019.5 |
| cell division protein zape | D4M06_RS10680 | Not Available | Negative | 2294625 - 2295752 | 43066.0 |
| duf1043 family protein | D4M06_RS10685 | Not Available | Positive | 2295946 - 2296344 | 14961.7 |
| serine endoprotease degq | D4M06_RS10690 | Not Available | Positive | 2296498 - 2297865 | 47238.0 |
| outer membrane-stress sensor serine endopeptidase degs | D4M06_RS10695 | Not Available | Positive | 2297955 - 2299022 | 37583.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




