Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome assembly rna-binding protein yhby | D4M06_RS10450 | Not Available | Positive | 2250807 - 2251100 | 10765.3 |
| transcription elongation factor grea | D4M06_RS10455 | Not Available | Negative | 2251256 - 2251732 | 17642.0 |
| serine-type d-ala-d-ala carboxypeptidase | D4M06_RS10460 | Not Available | Positive | 2251980 - 2253413 | 51829.4 |
| obg family gtpase cgta | D4M06_RS10465 | Not Available | Negative | 2253453 - 2254625 | 43258.2 |
| dmt family transporter | D4M06_RS10470 | Not Available | Negative | 2254641 - 2255606 | 34965.2 |
| 50s ribosomal protein l27 | D4M06_RS10475 | Not Available | Negative | 2255733 - 2255990 | 9125.01 |
| 50s ribosomal protein l21 | D4M06_RS10480 | Not Available | Negative | 2256011 - 2256322 | 11565.0 |
| octaprenyl diphosphate synthase | D4M06_RS10485 | Not Available | Positive | 2256581 - 2257552 | 35218.1 |
| dna-binding transcriptional regulator sfsb | D4M06_RS10490 | Not Available | Positive | 2257781 - 2258059 | 10495.6 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | D4M06_RS10495 | Not Available | Negative | 2258107 - 2259366 | 44850.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




