Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| permease | D4M06_RS10300 | Not Available | Negative | 2220115 - 2221155 | 37257.9 |
| nad(p)h-binding protein | D4M06_RS10305 | Not Available | Negative | 2221228 - 2221863 | 23197.3 |
| protein/nucleic acid deglycase | D4M06_RS10310 | Not Available | Positive | 2221991 - 2222509 | 18859.4 |
| yhbp family protein | D4M06_RS10315 | Not Available | Negative | 2222489 - 2222932 | 16719.2 |
| dna damage response exodeoxyribonuclease yhbq | D4M06_RS10320 | Not Available | Positive | 2222983 - 2223285 | 11241.6 |
| n-acetyltransferase | D4M06_RS10325 | Not Available | Negative | 2223272 - 2223775 | 18534.8 |
| scp2 domain-containing protein | D4M06_RS10330 | Not Available | Negative | 2223769 - 2224293 | 19673.0 |
| u32 family peptidase | D4M06_RS10335 | Not Available | Positive | 2224502 - 2225497 | 37035.2 |
| u32 family peptidase | D4M06_RS10340 | Not Available | Positive | 2225506 - 2226384 | 32523.1 |
| llm class flavin-dependent oxidoreductase | D4M06_RS10345 | Not Available | Positive | 2226465 - 2227472 | 37073.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




