Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter permease potb | D4M06_RS20775 | Not Available | Negative | 4397144 - 4398007 | 32353.4 |
| Gp245 | D4M06_RS20780 | Not Available | Negative | 4397991 - 4399127 | 43030.8 |
| Putative peptidase m20 | D4M06_RS20785 | Not Available | Positive | 4399377 - 4400603 | 44912.0 |
| Attl | Not Available | Not Available | Positive | 4401988 - 4401999 | Not Available |
| Integrase | D4M06_RS20795 | Not Available | Positive | 4402022 - 4403251 | 46730.6 |
| Transcriptional regulator | D4M06_RS20800 | Not Available | Positive | 4403616 - 4403804 | 7159.68 |
| hypothetical protein | D4M06_RS20805 | Not Available | Negative | 4403854 - 4404180 | 12201.5 |
| hypothetical protein | D4M06_RS20810 | Not Available | Negative | 4404305 - 4404478 | 6568.9 |
| host cell division inhibitor icd-like protein | D4M06_RS20815 | Not Available | Positive | 4404609 - 4404806 | 7391.89 |
| hypothetical protein | D4M06_RS20820 | Not Available | Positive | 4404799 - 4405011 | 7994.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




