Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-fucose:h+ symporter permease | D4M06_RS10200 | Not Available | Positive | 2201809 - 2203125 | 47577.6 |
| l-fucose isomerase | D4M06_RS10205 | Not Available | Positive | 2203158 - 2204933 | 64966.2 |
| l-fuculokinase | D4M06_RS10210 | Not Available | Positive | 2205042 - 2206460 | 52259.7 |
| l-fucose mutarotase | D4M06_RS10215 | Not Available | Positive | 2206462 - 2206884 | 15474.0 |
| l-fucose operon activator | D4M06_RS10220 | Not Available | Positive | 2206942 - 2207673 | 27349.7 |
| 23s rrna (cytidine(2498)-2'-o)-methyltransferase rlmm | D4M06_RS10225 | Not Available | Negative | 2207717 - 2208817 | 41907.5 |
| duf423 domain-containing protein | D4M06_RS10230 | Not Available | Negative | 2208810 - 2209205 | 14334.0 |
| transcriptional regulator gcva | D4M06_RS10235 | Not Available | Negative | 2209224 - 2210141 | 34403.4 |
| ygdi/ygdr family lipoprotein | D4M06_RS10240 | Not Available | Negative | 2210492 - 2210719 | 8174.67 |
| cysteine desulfurase csda | D4M06_RS10245 | Not Available | Positive | 2210911 - 2212116 | 43255.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




