Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna pseudouridine(65) synthase truc | D4M06_RS10150 | Not Available | Negative | 2190576 - 2191358 | 29710.5 |
| yqcc family protein | D4M06_RS10155 | Not Available | Negative | 2191358 - 2191687 | 12772.2 |
| secy-interacting protein | D4M06_RS10160 | Not Available | Negative | 2192309 - 2192854 | 20719.6 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | D4M06_RS10165 | Not Available | Positive | 2192922 - 2193770 | 32551.1 |
| nucleotide 5'-monophosphate nucleosidase | D4M06_RS10170 | Not Available | Positive | 2193882 - 2195246 | 50975.0 |
| haaap family serine/threonine permease | D4M06_RS10175 | Not Available | Positive | 2195803 - 2197092 | 46909.2 |
| l-serine ammonia-lyase ii | D4M06_RS10180 | Not Available | Positive | 2197150 - 2198517 | 48672.8 |
| flap endonuclease xni | D4M06_RS10185 | Not Available | Positive | 2198539 - 2199384 | 31500.9 |
| lactaldehyde reductase | D4M06_RS10190 | Not Available | Negative | 2199439 - 2200587 | 40515.7 |
| l-fuculose-phosphate aldolase | D4M06_RS10195 | Not Available | Negative | 2200615 - 2201262 | 23786.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




