Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoribonuclease mazf | D4M06_RS10100 | Not Available | Negative | 2178329 - 2178664 | 12098.7 |
| type ii toxin-antitoxin system antitoxin maze | D4M06_RS10105 | Not Available | Negative | 2178664 - 2178912 | 9356.24 |
| gtp pyrophosphokinase | D4M06_RS10110 | Not Available | Negative | 2178990 - 2181224 | 83880.4 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | D4M06_RS10115 | Not Available | Negative | 2181272 - 2182573 | 48186.3 |
| two-component sensor histidine kinase bara | D4M06_RS10120 | Not Available | Positive | 2182630 - 2185386 | 102460.0 |
| glucarate dehydratase | D4M06_RS10125 | Not Available | Negative | 2185619 - 2186959 | 49143.9 |
| glucarate dehydratase | D4M06_RS10130 | Not Available | Negative | 2186980 - 2188065 | 39960.6 |
| glucarate dehydratase | D4M06_RS10135 | Not Available | Negative | 2188099 - 2188320 | 7618.24 |
| mfs transporter | D4M06_RS10140 | Not Available | Negative | 2188322 - 2189674 | 49145.0 |
| flavodoxin | D4M06_RS10145 | Not Available | Negative | 2190109 - 2190558 | 16275.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




