Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfate adenylyltransferase subunit cysd | D4M06_RS09935 | Not Available | Negative | 2141118 - 2142026 | 35190.3 |
| alkaline phosphatase isozyme conversion aminopeptidase | D4M06_RS09940 | Not Available | Positive | 2142278 - 2143315 | 37929.3 |
| type i-e crispr-associated endoribonuclease cas2 | D4M06_RS09945 | Not Available | Negative | 2143705 - 2143998 | 11004.4 |
| type i-e crispr-associated endonuclease cas1 | D4M06_RS09950 | Not Available | Negative | 2143995 - 2144918 | 33425.8 |
| type i-e crispr-associated protein cas6/cse3/case | D4M06_RS09955 | Not Available | Negative | 2144915 - 2145565 | 24817.8 |
| type i-e crispr-associated protein cas5/casd | D4M06_RS09960 | Not Available | Negative | 2145547 - 2146293 | 28621.0 |
| type i-e crispr-associated protein cas7/cse4/casc | D4M06_RS09965 | Not Available | Negative | 2146304 - 2147359 | 38404.6 |
| type i-e crispr-associated protein cse2/casb | D4M06_RS09970 | Not Available | Negative | 2147371 - 2147907 | 20861.9 |
| type i-e crispr-associated protein cse1/casa | D4M06_RS09975 | Not Available | Negative | 2147904 - 2149466 | 59060.4 |
| type i toxin-antitoxin system hok family toxin | D4M06_RS09985 | Not Available | Negative | 2152455 - 2152607 | 5559.11 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




