Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase transcriptional activator flha | D4M06_RS09835 | Not Available | Positive | 2123196 - 2125274 | 78415.4 |
| nitrous oxide-stimulated promoter family protein | D4M06_RS09840 | Not Available | Negative | 2125311 - 2125664 | 13907.2 |
| hypothetical protein | D4M06_RS09845 | Not Available | Negative | 2125741 - 2125875 | 4890.38 |
| dna mismatch repair protein muts | D4M06_RS09850 | Not Available | Positive | 2125951 - 2128512 | 95296.5 |
| protein-serine/threonine phosphatase | D4M06_RS09855 | Not Available | Positive | 2128618 - 2129274 | 25087.7 |
| hypothetical protein | D4M06_RS09860 | Not Available | Negative | 2129315 - 2129551 | 9180.06 |
| ubid family decarboxylase | D4M06_RS09865 | Not Available | Negative | 2129562 - 2130989 | 52397.8 |
| ubix family flavin prenyltransferase | D4M06_RS09870 | Not Available | Negative | 2130989 - 2131582 | 21471.2 |
| marr family transcriptional regulator | D4M06_RS09875 | Not Available | Positive | 2131729 - 2132136 | 15509.8 |
| rna polymerase sigma factor rpos | D4M06_RS09880 | Not Available | Negative | 2132256 - 2133248 | 37975.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




