Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase large subunit | D4M06_RS09785 | Not Available | Negative | 2113620 - 2115329 | 64970.1 |
| formate hydrogenlyase subunit hycd | D4M06_RS09790 | Not Available | Negative | 2115347 - 2116270 | 33089.5 |
| formate hydrogenlyase subunit 3 | D4M06_RS09795 | Not Available | Negative | 2116273 - 2118099 | 64129.2 |
| 4fe-4s dicluster domain-containing protein | D4M06_RS09800 | Not Available | Negative | 2118096 - 2118707 | 21888.4 |
| formate hydrogenlyase regulator hyca | D4M06_RS09805 | Not Available | Negative | 2118832 - 2119293 | 17627.9 |
| hydrogenase maturation nickel metallochaperone hypa | D4M06_RS09810 | Not Available | Positive | 2119505 - 2119855 | 13168.9 |
| hydrogenase nickel incorporation protein hypb | D4M06_RS09815 | Not Available | Positive | 2119859 - 2120731 | 31513.8 |
| hydrogenase 3 maturation protein hypc | D4M06_RS09820 | Not Available | Positive | 2120722 - 2120994 | 9732.58 |
| hydrogenase formation protein hypd | D4M06_RS09825 | Not Available | Positive | 2120994 - 2122115 | 41299.6 |
| hydrogenase maturation carbamoyl dehydratase hype | D4M06_RS09830 | Not Available | Positive | 2122112 - 2123122 | 35156.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




