Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor p--(r)-beta-lysine ligase | D4M06_RS09625 | Not Available | Positive | 2078284 - 2079261 | 36978.1 |
| glutamate/gamma-aminobutyrate family transporter yjem | D4M06_RS09630 | Not Available | Positive | 2079480 - 2080982 | 54693.2 |
| miniconductance mechanosensitive channel mscm | D4M06_RS09635 | Not Available | Negative | 2081133 - 2084456 | 123976.0 |
| phosphatidylserine decarboxylase | D4M06_RS09640 | Not Available | Negative | 2084478 - 2085446 | 35936.4 |
| small ribosomal subunit biogenesis gtpase rsga | D4M06_RS09645 | Not Available | Negative | 2085543 - 2086595 | 39181.5 |
| oligoribonuclease | D4M06_RS09650 | Not Available | Positive | 2086690 - 2087235 | 20758.7 |
| Trna-ser | Not Available | Not Available | Positive | 2087446 - 2087538 | Not Available |
| carbon storage regulator csra | D4M06_RS09660 | Not Available | Negative | 2087854 - 2088039 | 6856.34 |
| alanine--trna ligase | D4M06_RS09665 | Not Available | Negative | 2088274 - 2090904 | 96037.9 |
| recombination regulator recx | D4M06_RS09670 | Not Available | Negative | 2091032 - 2091532 | 19411.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




