Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| divalent cation tolerance protein cuta | D4M06_RS09525 | Not Available | Negative | 2060830 - 2061168 | 12331.7 |
| anaerobic c4-dicarboxylate transporter | D4M06_RS09530 | Not Available | Negative | 2061284 - 2062585 | 45753.5 |
| aspartate ammonia-lyase | D4M06_RS09535 | Not Available | Negative | 2062703 - 2064139 | 52359.2 |
| membrane protein fxsa | D4M06_RS09540 | Not Available | Positive | 2064476 - 2064952 | 17679.1 |
| l-methionine/branched-chain amino acid transporter | D4M06_RS09545 | Not Available | Negative | 2064968 - 2066224 | 44801.2 |
| co-chaperone groes | D4M06_RS09550 | Not Available | Positive | 2066500 - 2066793 | 10387.6 |
| chaperonin groel | D4M06_RS09555 | Not Available | Positive | 2066837 - 2068483 | 57332.4 |
| duf4156 domain-containing protein | D4M06_RS09560 | Not Available | Positive | 2068621 - 2068974 | 11959.2 |
| hypothetical protein | D4M06_RS09565 | Not Available | Negative | 2069167 - 2070036 | 33009.0 |
| ef-p beta-lysylation protein epmb | D4M06_RS09570 | Not Available | Negative | 2070271 - 2071299 | 38714.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




