Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type v toxin-antitoxin system endoribonuclease antitoxin ghos | D4M06_RS09475 | Not Available | Positive | 2048395 - 2048691 | 11468.6 |
| type v toxin-antitoxin system toxin ghot | D4M06_RS09480 | Not Available | Positive | 2048719 - 2048892 | 6555.44 |
| lysine--trna ligase | D4M06_RS09485 | Not Available | Negative | 2049011 - 2050528 | 57829.9 |
| dipeptide/tripeptide permease dtpc | D4M06_RS09490 | Not Available | Negative | 2050765 - 2052222 | 53010.6 |
| lysine decarboxylase cada | D4M06_RS09495 | Not Available | Negative | 2052281 - 2054428 | 81264.7 |
| cadaverine/lysine antiporter | D4M06_RS09500 | Not Available | Negative | 2054508 - 2055842 | 46667.8 |
| dna-binding transcriptional activator cadc | D4M06_RS09505 | Not Available | Negative | 2056208 - 2057746 | 57816.1 |
| Trna-phe | Not Available | Not Available | Positive | 2058363 - 2058438 | Not Available |
| transcriptional regulator | D4M06_RS09515 | Not Available | Negative | 2058545 - 2059120 | 21932.3 |
| protein-disulfide reductase dsbd | D4M06_RS09520 | Not Available | Negative | 2059157 - 2060854 | 61842.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




