Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator melr | D4M06_RS09425 | Not Available | Negative | 2036530 - 2037438 | 34942.0 |
| alpha-galactosidase | D4M06_RS09430 | Not Available | Positive | 2037721 - 2039076 | 50572.8 |
| melibiose:sodium transporter melb | D4M06_RS09435 | Not Available | Positive | 2039191 - 2040600 | 52194.9 |
| duf2238 domain-containing protein | D4M06_RS09440 | Not Available | Negative | 2040739 - 2041368 | 23372.4 |
| class i fumarate hydratase | D4M06_RS09445 | Not Available | Negative | 2041491 - 2043137 | 60142.9 |
| anaerobic c4-dicarboxylate transporter | D4M06_RS09450 | Not Available | Negative | 2043215 - 2044555 | 47938.2 |
| two-component system response regulator dcur | D4M06_RS09455 | Not Available | Negative | 2045126 - 2045845 | 27489.9 |
| two-component system sensor histidine kinase dcus | D4M06_RS09460 | Not Available | Negative | 2045842 - 2047473 | 60584.4 |
| 4fe-4s mono-cluster protein yjdi | D4M06_RS09465 | Not Available | Positive | 2047654 - 2047884 | 8550.35 |
| n-acetyltransferase | D4M06_RS09470 | Not Available | Positive | 2047896 - 2048168 | 10469.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




