Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose abc transporter permease | D4M06_RS09275 | Not Available | Negative | 2005218 - 2006192 | 34011.9 |
| sugar abc transporter atp-binding protein | D4M06_RS09280 | Not Available | Negative | 2006189 - 2007709 | 55191.4 |
| response regulator | D4M06_RS09285 | Not Available | Positive | 2007823 - 2010093 | 82523.8 |
| hypothetical protein | D4M06_RS09290 | Not Available | Positive | 2010162 - 2010491 | 13327.1 |
| phosphonate metabolism protein phnp | D4M06_RS09295 | Not Available | Negative | 2010568 - 2011326 | 27899.3 |
| aminoalkylphosphonate n-acetyltransferase | D4M06_RS09300 | Not Available | Negative | 2011328 - 2011753 | 16319.5 |
| ribose 1,5-bisphosphokinase | D4M06_RS09305 | Not Available | Negative | 2011750 - 2012307 | 20744.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | D4M06_RS09310 | Not Available | Negative | 2012307 - 2013434 | 41710.5 |
| phosphonate c-p lyase system protein phnl | D4M06_RS09315 | Not Available | Negative | 2013431 - 2014111 | 24695.9 |
| phosphonate c-p lyase system protein phnk | D4M06_RS09320 | Not Available | Negative | 2014222 - 2014980 | 27818.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




