Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multidrug efflux transporter outer membrane subunit mdtp | D4M06_RS09225 | Not Available | Negative | 1993619 - 1995085 | 53513.4 |
| multidrug efflux transporter permease subunit mdto | D4M06_RS09230 | Not Available | Negative | 1995082 - 1997133 | 76123.1 |
| multidrug efflux transporter periplasmic adaptor subunit mdtn | D4M06_RS09235 | Not Available | Negative | 1997133 - 1998164 | 36954.4 |
| hypothetical protein | D4M06_RS09240 | Not Available | Negative | 1998183 - 1998458 | 10271.2 |
| alkyl sulfatase yjcs | D4M06_RS09245 | Not Available | Negative | 1998667 - 2000652 | 73111.9 |
| response regulator transcription factor | D4M06_RS09250 | Not Available | Positive | 2000943 - 2001650 | 26161.2 |
| carbohydrate kinase family protein | D4M06_RS09255 | Not Available | Negative | 2001647 - 2002648 | 36849.2 |
| ketose 1,6-bisphosphate aldolase | D4M06_RS09260 | Not Available | Negative | 2002645 - 2003505 | 31122.1 |
| d-lyxose/d-mannose family sugar isomerase | D4M06_RS09265 | Not Available | Negative | 2003520 - 2004203 | 25799.2 |
| abc transporter substrate-binding protein | D4M06_RS09270 | Not Available | Negative | 2004258 - 2005199 | 32790.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




