Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonia-forming nitrite reductase cytochrome c552 subunit | D4M06_RS09175 | Not Available | Positive | 1982283 - 1983719 | 53705.7 |
| cytochrome c nitrite reductase pentaheme subunit | D4M06_RS09180 | Not Available | Positive | 1983764 - 1984330 | 20715.6 |
| cytochrome c nitrite reductase fe-s protein | D4M06_RS09185 | Not Available | Positive | 1984327 - 1984998 | 24568.8 |
| cytochrome c nitrite reductase subunit nrfd | D4M06_RS09190 | Not Available | Positive | 1984995 - 1985951 | 35024.2 |
| heme lyase ccmf/nrfe family subunit | D4M06_RS09195 | Not Available | Positive | 1985971 - 1987689 | 63469.1 |
| heme lyase nrfefg subunit nrff | D4M06_RS09200 | Not Available | Positive | 1987682 - 1988065 | 14565.0 |
| heme lyase nrfefg subunit nrfg | D4M06_RS09205 | Not Available | Positive | 1988062 - 1988658 | 22800.5 |
| glutamate/aspartate:proton symporter gltp | D4M06_RS09210 | Not Available | Positive | 1989000 - 1990313 | 47134.0 |
| sel1 repeat family protein | D4M06_RS09215 | Not Available | Negative | 1990491 - 1991180 | 25080.4 |
| formate dehydrogenase n subunit alpha, selenocysteine-containing | D4M06_RS09220 | Not Available | Negative | 1991274 - 1993421 | 79258.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




