Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinone oxidoreductase | D4M06_RS09075 | Not Available | Negative | 1957773 - 1958756 | 35174.1 |
| replicative dna helicase dnab | D4M06_RS09080 | Not Available | Positive | 1958839 - 1960254 | 52409.1 |
| alanine racemase | D4M06_RS09085 | Not Available | Positive | 1960307 - 1961386 | 39197.3 |
| aromatic amino acid transaminase | D4M06_RS09090 | Not Available | Positive | 1961639 - 1962832 | 43507.2 |
| hypothetical protein | D4M06_RS09095 | Not Available | Negative | 1963171 - 1963530 | 13862.5 |
| acid phosphatase apha | D4M06_RS09100 | Not Available | Positive | 1963931 - 1964644 | 26090.9 |
| yjbq family protein | D4M06_RS09105 | Not Available | Positive | 1964755 - 1965171 | 15656.8 |
| mmcq/yjbr family dna-binding protein | D4M06_RS09110 | Not Available | Positive | 1965175 - 1965531 | 13520.2 |
| excinuclease abc subunit uvra | D4M06_RS09115 | Not Available | Negative | 1965566 - 1968388 | 103890.0 |
| single-stranded dna-binding protein ssb1 | D4M06_RS09120 | Not Available | Positive | 1968643 - 1969179 | 18976.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




