Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfurtransferase tusa family protein | D4M06_RS09020 | Not Available | Positive | 1950326 - 1950553 | 8092.61 |
| exodeoxyribonuclease i | D4M06_RS09025 | Not Available | Negative | 1950596 - 1952020 | 54400.5 |
| alpa family phage regulatory protein | D4M06_RS09035 | Not Available | Negative | 1953362 - 1953553 | 7215.7 |
| hypothetical protein | D4M06_RS09040 | Not Available | Negative | 1953631 - 1953975 | 12630.3 |
| duf551 domain-containing protein | D4M06_RS09045 | Not Available | Negative | 1954163 - 1954399 | 9028.45 |
| duf1076 domain-containing protein | D4M06_RS09050 | Not Available | Positive | 1954416 - 1954537 | 4315.24 |
| dini-like family protein | D4M06_RS09055 | Not Available | Negative | 1954698 - 1954946 | 9408.14 |
| site-specific integrase | D4M06_RS09060 | Not Available | Negative | 1955008 - 1956105 | 41758.1 |
| trna dihydrouridine(20/20a) synthase dusa | D4M06_RS09065 | Not Available | Positive | 1956194 - 1957231 | 38571.2 |
| envelope stress response protein pspg | D4M06_RS09070 | Not Available | Positive | 1957365 - 1957607 | 9024.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




