Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase hisb | D4M06_RS08970 | Not Available | Negative | 1940686 - 1941753 | 40292.4 |
| histidinol-phosphate transaminase | D4M06_RS08975 | Not Available | Negative | 1941753 - 1942823 | 39390.4 |
| histidinol dehydrogenase | D4M06_RS08980 | Not Available | Negative | 1942820 - 1944124 | 46076.9 |
| atp phosphoribosyltransferase | D4M06_RS08985 | Not Available | Negative | 1944130 - 1945029 | 33353.8 |
| his operon leader peptide | D4M06_RS08990 | Not Available | Negative | 1945175 - 1945225 | 2072.42 |
| sdr family oxidoreductase | D4M06_RS08995 | Not Available | Positive | 1945651 - 1946475 | 29681.7 |
| lysr family transcriptional regulator | D4M06_RS09000 | Not Available | Positive | 1946521 - 1947450 | 34213.0 |
| membrane protein yoei | D4M06_RS09005 | Not Available | Positive | 1947665 - 1947727 | 2241.66 |
| putrescine/proton symporter plap | D4M06_RS09010 | Not Available | Positive | 1947717 - 1949075 | 49540.5 |
| transport protein yeee | D4M06_RS09015 | Not Available | Positive | 1949254 - 1950312 | 38012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




