Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mannose-1-phosphate guanylyltransferase 2 | D4M06_RS08920 | Not Available | Positive | 1929004 - 1930452 | 54273.1 |
| phosphomannomutase cpsg | D4M06_RS08925 | Not Available | Positive | 1930456 - 1931826 | 50342.4 |
| gdp-perosamine n-acetyltransferase | D4M06_RS08930 | Not Available | Positive | 1933089 - 1933754 | 23743.8 |
| nadp-dependent phosphogluconate dehydrogenase | D4M06_RS08935 | Not Available | Positive | 1933955 - 1935361 | 51480.2 |
| udp-glucose 6-dehydrogenase | D4M06_RS08940 | Not Available | Positive | 1935610 - 1936776 | 43715.3 |
| lps o-antigen chain length determinant protein wzzb | D4M06_RS08945 | Not Available | Positive | 1936922 - 1937899 | 36307.7 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | D4M06_RS08950 | Not Available | Negative | 1937996 - 1938607 | 22842.2 |
| imidazole glycerol phosphate synthase subunit hisf | D4M06_RS08955 | Not Available | Negative | 1938601 - 1939377 | 28456.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | D4M06_RS08960 | Not Available | Negative | 1939359 - 1940096 | 26032.2 |
| imidazole glycerol phosphate synthase subunit hish | D4M06_RS08965 | Not Available | Negative | 1940096 - 1940686 | 21654.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




