Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase yegi | D4M06_RS08715 | Not Available | Positive | 1880467 - 1882407 | 71181.4 |
| molecular chaperone | D4M06_RS08720 | Not Available | Negative | 1882420 - 1883772 | 49302.0 |
| dna-3-methyladenine glycosylase 2 | D4M06_RS08725 | Not Available | Positive | 1883906 - 1884754 | 31373.0 |
| uridine kinase | D4M06_RS08735 | Not Available | Positive | 1888491 - 1889132 | 24354.6 |
| dctp deaminase | D4M06_RS08740 | Not Available | Positive | 1889224 - 1889805 | 21252.4 |
| outer membrane assembly protein asma | D4M06_RS08745 | Not Available | Positive | 1889827 - 1891680 | 68955.9 |
| xre family transcriptional regulator | D4M06_RS08750 | Not Available | Negative | 1891733 - 1892023 | 10777.0 |
| type ii toxin-antitoxin system rele/pare family toxin | D4M06_RS08755 | Not Available | Negative | 1892013 - 1892351 | 13251.7 |
| terc family protein | D4M06_RS08760 | Not Available | Negative | 1892426 - 1894009 | 59439.9 |
| polysaccharide export protein | D4M06_RS08765 | Not Available | Positive | 1894668 - 1895807 | 41912.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




