Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system sensor histidine kinase baes | D4M06_RS08665 | Not Available | Negative | 1867574 - 1868977 | 52047.4 |
| mfs transporter | D4M06_RS08670 | Not Available | Negative | 1868974 - 1870389 | 50986.3 |
| multidrug efflux rnd transporter permease subunit mdtc | D4M06_RS08675 | Not Available | Negative | 1870390 - 1873467 | 111055.0 |
| multidrug efflux rnd transporter permease subunit mdtb | D4M06_RS08680 | Not Available | Negative | 1873468 - 1876590 | 112102.0 |
| multidrug efflux rnd transporter subunit mdta | D4M06_RS08685 | Not Available | Negative | 1876590 - 1877837 | 44500.8 |
| type i toxin-antitoxin system ibs family toxin | D4M06_RS08690 | Not Available | Positive | 1878117 - 1878173 | 2079.86 |
| type i toxin-antitoxin system ibs family toxin | D4M06_RS08695 | Not Available | Positive | 1878445 - 1878501 | 2136.9 |
| type i toxin-antitoxin system toxin ibsa | D4M06_RS08700 | Not Available | Positive | 1878773 - 1878832 | 2232.03 |
| vwa domain-containing protein | D4M06_RS08705 | Not Available | Positive | 1879053 - 1879712 | 24144.8 |
| protein phosphatase 2c domain-containing protein | D4M06_RS08710 | Not Available | Positive | 1879709 - 1880470 | 27477.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




