Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2574 family protein | D4M06_RS08510 | Not Available | Positive | 1838748 - 1839029 | 10216.1 |
| fimbrial protein | D4M06_RS08515 | Not Available | Positive | 1839321 - 1839863 | 18833.5 |
| fimbria/pilus periplasmic chaperone | D4M06_RS08520 | Not Available | Positive | 1839951 - 1840625 | 25024.5 |
| fimbrial protein | D4M06_RS08530 | Not Available | Positive | 1843132 - 1844166 | 37437.8 |
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | D4M06_RS08535 | Not Available | Negative | 1844248 - 1844586 | 12482.8 |
| nickel/cobalt efflux protein rcna | D4M06_RS08540 | Not Available | Negative | 1844804 - 1845655 | 31631.3 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | D4M06_RS08545 | Not Available | Positive | 1845776 - 1846048 | 10134.5 |
| outer membrane protein | D4M06_RS08550 | Not Available | Negative | 1846158 - 1846472 | 11622.0 |
| hypothetical protein | D4M06_RS08555 | Not Available | Negative | 1846482 - 1846829 | 12515.9 |
| transcription factor | D4M06_RS08560 | Not Available | Negative | 1847880 - 1848119 | 8940.83 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




