Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vwa domain-containing protein | D4M06_RS08455 | Not Available | Negative | 1818498 - 1819634 | 42153.7 |
| hypothetical protein | D4M06_RS08460 | Not Available | Negative | 1819627 - 1820358 | 26394.8 |
| hypothetical protein | D4M06_RS08465 | Not Available | Negative | 1820377 - 1821906 | 56149.9 |
| moxr family atpase | D4M06_RS08470 | Not Available | Negative | 1821917 - 1823005 | 39686.6 |
| hypothetical protein | D4M06_RS08475 | Not Available | Negative | 1824246 - 1824563 | 12593.9 |
| duf4132 domain-containing protein | D4M06_RS08480 | Not Available | Negative | 1824625 - 1828254 | 137500.0 |
| duf4132 domain-containing protein | D4M06_RS08485 | Not Available | Negative | 1828264 - 1829805 | 57134.9 |
| wgr domain-containing protein | D4M06_RS08490 | Not Available | Negative | 1829969 - 1831249 | 48562.6 |
| methionine--trna ligase | D4M06_RS08500 | Not Available | Negative | 1835212 - 1837245 | 76258.9 |
| iron-sulfur cluster carrier protein apbc | D4M06_RS08505 | Not Available | Positive | 1837377 - 1838486 | 39940.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




