Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 593596 SAMN10057753-rid9463433.guided.151 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1370210 bp
Thymine Count
1359659 bp
Guanine Count
1361880 bp
Cytosine Count
1378938 bp
Genome Length
5488722 bp
Protein-coding Genes
4966 genes
Non-Coding Genes
365 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iii secretion system lee inner membrane ring protein escj | D4M06_RS08300 | Not Available | Negative | 1791187 - 1791759 | 20758.1 |
| esci/ysci/hrpb family type iii secretion system inner rod protein | D4M06_RS08305 | Not Available | Negative | 1791762 - 1792139 | 13272.8 |
| type iii secretion system lee cytoprotective effector espz | D4M06_RS08310 | Not Available | Negative | 1792223 - 1792522 | 9656.61 |
| type iii secretion system lee chaperone cesl | D4M06_RS08315 | Not Available | Positive | 1792707 - 1793060 | 13942.8 |
| type iii secretion system lee export apparatus protein escv | D4M06_RS08320 | Not Available | Positive | 1793057 - 1795084 | 75101.7 |
| type iii secretion system lee atpase escn | D4M06_RS08325 | Not Available | Positive | 1795068 - 1796408 | 48819.2 |
| type iii secretion protein | D4M06_RS08330 | Not Available | Positive | 1796468 - 1796788 | 12363.7 |
| type iii secretion system lee needle length regulator escp | D4M06_RS08335 | Not Available | Positive | 1796781 - 1797197 | 16548.9 |
| type iii secretion system lee ring protein escq | D4M06_RS08340 | Not Available | Positive | 1797160 - 1798077 | 34894.7 |
| type iii secretion system lee effector esph | D4M06_RS08345 | Not Available | Positive | 1798108 - 1798614 | 19283.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




